dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00227
Location and strand information: 340653 - 342467 (+)
Family: 4.C.1.1.14
Protein type: TC
Protein description: Long-chain-fatty-acid--CoA ligase FadD15

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00228
Location and strand information: 342648 - 344666 (+)
Family: GH43_10|GH43|CBM6
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.843
Protein molecular weight: 76710.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00229
Location and strand information: 344660 - 349078 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00230
Location and strand information: 349262 - 352585 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00231
Location and strand information: 352609 - 354633 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00232
Location and strand information: 354759 - 357350 (+)
Family: GH3
Protein type: CAZyme
Protein description: Xylan 1,4-beta-xylosidase
Protein isoelectric point: 5.6263
Protein molecular weight: 95912.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00233
Location and strand information: 357422 - 358900 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.526
Protein molecular weight: 54823.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00234
Location and strand information: 359089 - 359670 (+)
Family: GerE
Protein type: TF
Protein description: ECF RNA polymerase sigma factor SigL

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00235
Location and strand information: 359738 - 360676 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00236
Location and strand information: 360801 - 364157 (+)
Family: 1.B.14.6.13
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000211_1|CGC10
Gene ID: MGYG000000211_00237
Location and strand information: 364170 - 365756 (+)
Family: 8.A.46.2.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000211_00227	Long-chain-fatty-acid--CoA ligase FadD15	TC	340653	342467	+	4.C.1.1.14
MGYG000000211_00228	hypothetical protein	CAZyme	342648	344666	+	GH43_10\| GH43\| CBM6
MGYG000000211_00229	Sensor histidine kinase RcsC	TF	344660	349078	-	HTH_AraC
MGYG000000211_00230	TonB-dependent receptor SusC	TC	349262	352585	+	1.B.14.6.1
MGYG000000211_00231	hypothetical protein	null	352609	354633	+	SusD-like_3\| SusD_RagB
MGYG000000211_00232	Xylan 1,4-beta-xylosidase	CAZyme	354759	357350	+	GH3
MGYG000000211_00233	hypothetical protein	CAZyme	357422	358900	-	GH28
MGYG000000211_00234	ECF RNA polymerase sigma factor SigL	TF	359089	359670	+	GerE
MGYG000000211_00235	hypothetical protein	STP	359738	360676	+	FecR
MGYG000000211_00236	TonB-dependent receptor SusC	TC	360801	364157	+	1.B.14.6.13
MGYG000000211_00237	hypothetical protein	TC	364170	365756	+	8.A.46.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature